This function validates the format of the input mouse gene expression file is correct for process by FIT. It will output an error message int he following cases: (a) Less than 80 (b) Sample names don't start with "c_" or "d_" (for microarray daat only) (c) There are at least 3 disease samples and 3 control samples (for microarray daat only) (d) The data i snot log-transformed (the range of values are either <0 or >100) (for microarray daat only)
1 | CheckFormat(MouseData, DataType)
|
MouseData |
The mouse data, in CSV format |
DataType |
'microarray' or 'rnaseq' |
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