Hallmark: Hallmark Pathways from MSigDB

HallmarkR Documentation

Hallmark Pathways from MSigDB

Description

A dataset containing the Hallmark gene sets from MSigDB.

Usage

Hallmark

Format

A named list of length 50 containing Hallmark gene sets.

Source

http://software.broadinstitute.org/gsea/msigdb/download_file.jsp?filePath=/resources/msigdb/6.2/h.all.v6.2.symbols.gmt

References

Liberzon A, Birger C, Thorvaldsdóttir H, Ghandi M, Mesirov JP, Tamayo P. The Molecular Signatures Database (MSigDB) hallmark gene set collection. Cell Syst. 2015 Dec 23;1(6):417-425.


RausellLab/CelliD documentation built on Jan. 12, 2024, 3:44 a.m.