dialignrLoess: Modified loess for condition handling

In Roestlab/DIAlign: Dynamic Programming Based Alignment of MS2 Chromatograms

Description

Modified loess for condition handling

Usage

dialignrLoess(RUNS_RT, spanvalue)

Arguments

RUNS_RT	(data-frame) must have three calumns: transition_group_id, RT.eXp, and RT.ref.
spanvalue	(numeric) spanvalue for LOESS fit. For targeted proteomics 0.1 could be used.

Value

An object of class "loess" or "lm".

Author(s)

Shubham Gupta, [e-mail]

ORCID: 0000-0003-3500-8152

License: (c) Author (2020) + GPL-3 Date: 2020-07-11

See Also

getLinearfit, getLOESSfit

Examples

df <- data.frame("transition_group_id" = 1:10, "RT.eXp" = 2:11, "RT.ref" = 10:19)
## Not run: 
dialignrLoess(df, 0.1)
dialignrLoess(df[1:4,], 0.1)

## End(Not run)

Roestlab/DIAlign documentation built on Feb. 25, 2021, 5:18 p.m.