filenamesFromMZML: Get mzML filenames from the directory.

In Roestlab/DIAlign: Dynamic Programming Based Alignment of MS2 Chromatograms

Description

Reads all mzML names avaialble in the directory.

Usage

filenamesFromMZML(dataPath, chromFile)

Arguments

dataPath

(char) Path to xics and osw directory.

Value

A dataframe with two columns:

runName	(string) contain respective mzML names without extension.
chromatogramFile	(string) Path to the chromatogram file.

Author(s)

Shubham Gupta, [e-mail]

ORCID: 0000-0003-3500-8152

License: (c) Author (2019) + GPL-3 Date: 2019-12-14

Examples

dataPath <- system.file("extdata", package = "DIAlignR")
## Not run: 
filenamesFromMZML(dataPath)

## End(Not run)

Roestlab/DIAlign documentation built on Feb. 25, 2021, 5:18 p.m.