R/DATA.EX.R

In RomanSchefzik/SimBPDD: Simulating differential distributions for Beta-Poisson models

#' Examplary single-cell RNA-sequencing data set
#'
#' An examplary single-cell RNA-sequencing data set based on an excerpt of the data set by Pollen et al. (2014).
#'
#' @docType data
#' 
#' @usage data(DATA.EX)
#'
#' @format A data matrix containing normalized expression values for 20 genes (rows) and 301 cells (samples; columns)
#'
#' @references A. A. Pollen, T. J. Nowakowski, J. Shuga, X. Wang, A. A. Leyrat, J. H. Lui, N. Li, L. Szpankowski, B. Fowler, P. Chen, N. Ramalingam, G. Sun, M. Thu, M. Norris, R. Lebofsky, D. Toppani, D. W. Kemp II, M. Wong, B. Clerkson, B. N. Jones, S. Wu, L. Knutsson, B. Alvarado, J. Wang, L. S. Weaver, A. P. May, R. C. Jones, M. A. Unger, A. R. Kriegstein, and J. A. A. West (2014). Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex. Nature Biotechnology, 32:1053-1058.
#' 
#' @source Excerpt of the data set by Pollen et al. (2014), available at \url{https://hemberg-lab.github.io/scRNA.seq.datasets/human/tissues/}
"DATA.EX"