Man pages for RuiyuRayWang/scWidgets
A collection of scRNAseq analysis functions
| avgLogExp | Compute average log expression |
| CalckBET | k-Nearest Neighbour Batch Effect Test |
| DoMultiBarHeatmap | Enhanced Feature expression heatmap with Customizable Bars |
| extract_max | Extract max value of y axis |
| geosketch | Geometric Sketching |
| loadGencodeAnno | Load gencode vM21 annotation to workspace. |
| loadIUPHARDatabase | Load IUPHAR database to workspace. |
| modify_vlnplot | Parse Seurat violin plot |
| parse_title | Parse title length |
| renameRows | Rename Row Names (Ensembl ID to Symbol) |
| reorderIdents | Reorder Seurat object factor order in metadata |
| showColorsWithNames | showColorsWithNames |
| Silhouette | Silhouette Plot |
| SilhouetteBoot | Bootstrapped silhouette score |
| SSW | Seurat Standard Workflow (SSW) |
| StackedVlnPlot | Make stacked violin plot |
