StackedVlnPlot: Make stacked violin plot
In RuiyuRayWang/scWidgets: A collection of scRNAseq analysis functions
Description
Usage
Arguments
Details
Value
View source: R/stackedViolin.R
Description
Reproduce scanpy stacked violin plot with Seurat.
Usage
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StackedVlnPlot(
obj,
features,
pt.size = 0,
plot.margin = ggplot2::unit(c(-0.75, 0, -0.75, 0), "cm"),
wrap_title = NULL,
break_length = 23,
...
)
Arguments
obj
A Seurat object.
features
Genes to be plotted.
pt.size
Size of jitter points. Default is 0 (No point is plotted).
plot.margin
Adjust the white space between each plot.
Details
Credit to: Tang Ming
https://divingintogeneticsandgenomics.rbind.io/post/stacked-violin-plot-for-visualizing-single-cell-data-in-seurat/
Value
A ggplot object
RuiyuRayWang/scWidgets documentation built on Dec. 18, 2021, 11:54 a.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value
View source: R/stackedViolin.R
Description
Reproduce scanpy stacked violin plot with Seurat.
Usage
1 2 3 4 5 6 7 8 9 | StackedVlnPlot(
obj,
features,
pt.size = 0,
plot.margin = ggplot2::unit(c(-0.75, 0, -0.75, 0), "cm"),
wrap_title = NULL,
break_length = 23,
...
)
|
Arguments
obj |
A Seurat object. |
features |
Genes to be plotted. |
pt.size |
Size of jitter points. Default is 0 (No point is plotted). |
plot.margin |
Adjust the white space between each plot. |
Details
Credit to: Tang Ming https://divingintogeneticsandgenomics.rbind.io/post/stacked-violin-plot-for-visualizing-single-cell-data-in-seurat/
Value
A ggplot object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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