Man pages for Rvirgenslane/Hotgenes
For Visualizing Differential Expression Analysis
| AutoTation | Builds color annotations for pheatmap |
| BatchGSEA | Performs GSEA for all Hotgenes contrasts |
| Categorical_Table | Generates a table of Categorical variables from FactoMineR... |
| DEseq2_export | Prepares DESeq2 object for visualization |
| FactoWrapper | FactoMiner wrapper used by Shiny_DE_Viz for PCA/HCPC of... |
| GeneSet_Exprs | Exports Expression data for a GeneSet of interest |
| get_anno | Prepares gets annotation from FASTA file |
| Hotgenes2GeneSet | Generates a custom GeneSet from a Hotgenes object |
| hotgenes_csv | Exports hotgenes object to csv files |
| Limma_Adj_pval | Returns adjusted pvalue from decideTests function, instead of... |
| Limma_export | Prepares Limma object for visualization |
| Pheatmap_Viz | Provides expression data for select genes and samples |
| Quanti_Table | Generates a table of quantitative variables from FactoMineR... |
| Shiny_DE_viz | R shiny app for visualizing DE analysis |
| Vplot | Wrapper for EnhancedVolcano |
