calc_basic_reproduction_number_kr: Calculate basic reproduction number according to Keeling &...
In SC-COSMO/sccosmomcma: Stanford-CIDE COronavirus Simulation MOdel (SC-COSMO) for Mexico City Metropolitan Area Analysis
Description
Usage
Arguments
Value
References
View source: R/02_model_output_calc_plot_functions.R
Description
calc_basic_reproduction_number_kr calculates the basic reproduction
number according to Keeling & Rohani.
Usage
1
calc_basic_reproduction_number_kr(l_out_cosmo, v_time = 2:10)
Arguments
l_out_cosmo
List with output from SC-COSMO and all parameters.
v_time
Vector with times at which basic reproduction number is
desired to be calculated.
Value
A scalar with the basic reproduction number.
References
Emilia Vynnycky and Richard G White. An introduction to infectious
disease modelling. Oxford, New York: Oxford University Press, 2010.
Keeling, M. J., & Rohani, P. Modeling Infectious Diseases in
Humans and Animals. Princeton University Press, 2008.
SC-COSMO/sccosmomcma documentation built on Dec. 18, 2021, 11:56 a.m.
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Description Usage Arguments Value References
View source: R/02_model_output_calc_plot_functions.R
Description
calc_basic_reproduction_number_kr calculates the basic reproduction
number according to Keeling & Rohani.
Usage
1 | calc_basic_reproduction_number_kr(l_out_cosmo, v_time = 2:10)
|
Arguments
l_out_cosmo |
List with output from SC-COSMO and all parameters. |
v_time |
Vector with times at which basic reproduction number is desired to be calculated. |
Value
A scalar with the basic reproduction number.
References
Emilia Vynnycky and Richard G White. An introduction to infectious disease modelling. Oxford, New York: Oxford University Press, 2010.
Keeling, M. J., & Rohani, P. Modeling Infectious Diseases in Humans and Animals. Princeton University Press, 2008.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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