tf2tar: TF-target regulations
In SCBIT-YYLab/DysRegSig: Gene dysregulation analysis and construction of mechanistic signature in cancer
Description
Usage
Details
References
Examples
Description
TF-target regulations within a reference GRN.
Usage
1
Details
The TF-target relationships were predicted by FIMO with TF motif data, which was downloaded from HumanTF database.
References
Grant C E, Bailey T L, Noble W S. FIMO: scanning for occurrences of a given motif. Bioinformatics. 2011, 27(7): 1017-8.
Lambert S A, Jolma A, Campitelli L F, et al. The Human Transcription Factors. Cell. 2018, 172(4): 650-65.
Examples
1
2
SCBIT-YYLab/DysRegSig documentation built on July 19, 2021, 4:38 a.m.
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Description Usage Details References Examples
Description
TF-target regulations within a reference GRN.
Usage
1 |
Details
The TF-target relationships were predicted by FIMO with TF motif data, which was downloaded from HumanTF database.
References
Grant C E, Bailey T L, Noble W S. FIMO: scanning for occurrences of a given motif. Bioinformatics. 2011, 27(7): 1017-8. Lambert S A, Jolma A, Campitelli L F, et al. The Human Transcription Factors. Cell. 2018, 172(4): 650-65.
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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