Files in SJTU-CGM/vPanG
An R package to analyze and visualize PAV results from pan-genome of "map-to-pan" strategy.
DESCRIPTION
NAMESPACE
R/cov_density.R
R/cov_heatmap.R
R/cov_obj.R
R/pav_cluster.R
R/pav_halfviolin.R
R/pav_heatmap.R
R/pav_hist.R
R/pav_obj.R
R/pav_pca.R
R/pav_stackbar.R
R/phen_plot.R
R/phen_stat.R
R/sim_multi.R
R/sim_plot.R
R/sim_stat.R
R/utils.R
README.md
data/vPanG_demo.RData
man/cov_density.Rd
man/cov_heatmap.Rd
man/get_cov_obj.Rd
man/get_pav_obj.Rd
man/pav_cluster.Rd
man/pav_halfviolin.Rd
man/pav_heatmap.Rd
man/pav_hist.Rd
man/pav_pca.Rd
man/pav_stackbar.Rd
man/phen_bar.Rd
man/phen_block.Rd
man/phen_heatmap.Rd
man/phen_manhattan.Rd
man/phen_stat.Rd
man/phen_violin.Rd
man/sim_multi_plot.Rd
man/sim_multi_stat.Rd
man/sim_plot.Rd
man/sim_stat.Rd
vignettes/.gitignore
vignettes/vPanG.Rmd
