In SOLV-Code/SPATFunctions-Package: Functions for the Salmon Pattern Analysis Tool

Introduction

General Purpose

Patterns between time series

Specific topic area

Built for and tested with salmon population time series, which have the following typical characteristics:

• usually short and gappy
• b
• c

Previous Work

• Peterman and Dorner (2012): 64 sockeye stocks, correlation in spawner-recruit residuals
• Dorner, Catalano and Peterman (2018): 24(?) Chinook stocks, DFA to find clusters in R/S data

Package Design

Focus of the package function

guiding principles for the design of {SPATFunctions}

• exploratory and versatile
• fast
• easy integration into shiny apps

Example 1: Spawner-Recruit Data for 19 Stocks

# Add two numbers together
add <- function(a, b) a + b
add(10, 20)

plot(1:10)
plot(10:1)

SOLV-Code/SPATFunctions-Package documentation built on April 25, 2020, 12:59 a.m.