SU-CompBio/SplicingFactory: Splicing Diversity Analysis for Transcriptome Data
The SplicingFactory R package uses transcript-level expression values to analyze splicing diversity based on various statistical measures, like Shannon entropy or the Gini index. These measures can quantify transcript isoform diversity within samples or between conditions. Additionally, the package analyzes the isoform diversity data, looking for significant changes between conditions.
Getting started
Browse package contents
Package details |
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| Bioconductor views | AlternativeSplicing DifferentialSplicing RNASeq TranscriptomeVariant Transcriptomics |
| Maintainer | |
| License | GPL-3 + file LICENSE |
| Version | 1.3.1 |
| URL | https://github.com/esebesty/SplicingFactory |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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