API for SWittouck/tidygenomes
A Grammar of Genome Data Manipulation
| Global functions | |
|---|---|
| add_exclusivity | Man page Source code |
| add_gcd | Man page Source code |
| add_genome_metadata | Man page |
| add_orthogroup_measures | Man page Source code |
| add_patterns | Man page Source code |
| add_phylogroup_color | Man page Source code |
| add_phylogroup_measures | Man page Source code |
| add_phylogroups | Man page |
| add_rootbranch | Man page |
| add_tidygenomes | Man page |
| as_tidygenomes | Man page Source code |
| collapse_species | Man page Source code |
| complete_pairs | Man page Source code |
| dist2pairs | Man page Source code |
| filter_genomes | Man page Source code |
| filter_orthogroups | Man page Source code |
| fix_pair_order | Man page |
| genomes | Man page Source code |
| get_tree | Man page Source code |
| ggtree_augmented | Man page Source code |
| heatmap | Man page |
| inflate_pangenome | Man page |
| map_patterns | Man page Source code |
| nodes_postorder | Man page Source code |
| nodes_preorder | Man page Source code |
| orthogroups | Source code |
| pairs | Man page Source code |
| pairs2matrix | Man page Source code |
| pangenome_matrix | Man page Source code |
| prepare_tidygenomes | Man page |
| read_pangenome | Man page Source code |
| read_phylip_distmat | Man page Source code |
| remove_phylogroups | Man page |
| root_tree | Man page |
| root_tree.phylo | Man page |
| tidygenomes | Man page |
| update_genomes | Man page Source code |
| upset_plot | Man page Source code |
