naImpute: naImpute

In Sage-Bionetworks/CMSclassifier: prediction of the Consensus Molecular Subtype (CMS) of colorectal carcinomas based on log2_scaled Gene Expression Profiles (GEP)

Description

impute NA values in a dataframe

Usage

naImpute(Exp,G=NULL)

Arguments

Exp	a dataframe of GEP measures, samples in columns, genes in rows, rownames corresponding to Entrez IDs
G	a vector of character strings (optionnal) : entrez gene ids that must be found in the rownames of Exp (will be added if absent, imputed value = global mean)

Value

the imputed datataframe

Note

This is a contribution from the Tumor Identity Cards (CIT) program founded by the 'Ligue Nationale Contre le Cancer' (France): http://cit.ligue-cancer.net. For any question please contact [e-mail]

Author(s)

Aurelien de Reynies

Sage-Bionetworks/CMSclassifier documentation built on May 9, 2019, 12:10 p.m.