baranyi: Baranyi growth model

Description Usage Arguments Value Author(s) References Examples

Description

Baranyi growth model as defined in Kelly et al.

Usage

1
  baranyi(x, mu, l, z0, zmax)

Arguments

x

numeric vector: time points for which log(OD) must be computed

mu

numeric scalar: maximal growth rate parameter

l

numeric scalar: time lag parameter

z0

numeric scalar: minimal log(OD) parameter

zmax

numeric scalar: maximal log(OD) parameter

Value

numeric vector: log(OD) for the time points given in x

Author(s)

Julien Gagneur

References

Kelly et al., The use of dummy data points when fitting bacterial growth curves, IMA Journal of Mathematics Applied in Medicine and Biology (1999) 16, 155-170

Examples

1
2
3
x = 1:1000
y = baranyi(x, mu=0.01, l=200, z0=1, zmax=5)
plot(x,y)

SamGG/cellGrowth documentation built on May 9, 2019, 3:30 a.m.