readGenios: Read Tecan Genios data files
In SamGG/cellGrowth: Fitting cell population growth models

Description Usage Arguments Value Author(s) See Also Examples

Read raw data file form Tecan Genios instrument

1	readGenios(file)

file

filename

a list with entries:

`time`	a `numeric` vector of time points
`OD`	a `data.frame` vector of measured OD. The colnames are the well names.
`read`	a `numeric` vector of read numbers
`temperature`	a `numeric` vector of temperatures
`header`	a `character` vector: the header of the file

Julien Gagneur

readYeastGrower

# Get file names
# Parse file
dat = readGenios( system.file("extdata", "tecan_genios.txt", package="cellGrowth") )

# fit
n <- names( dat$OD)[36]
fit <- fitCellGrowth(x=dat$time,z=log2(dat$OD[[n]]), model = "locfit",locfit.h=6*60*60)
plot(fit)