addVariantAnnotations: Annotate variant file from gnomAD.
In SandersKM/MendelianVariants:
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Add readable, descriptive annotations and scores to a gnomAD variant file.
Usage
1
addVariantAnnotations(df, gene.of.interest.symbol)
Arguments
df
gnomAD variant data frame
gene.of.interest.symbol
HGNC Symbol
Value
A data frame with annotated variants.
Author(s)
Kate Sanders
Examples
1
2
3
data("MUC1_variants")
cleanVariants <- removeUnwantedVariants(MUC1_variants)
annotatedVariants <- addVariantAnnotations(cleanVariants, "MUC1")
SandersKM/MendelianVariants documentation built on May 12, 2019, 4:35 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Add readable, descriptive annotations and scores to a gnomAD variant file.
Usage
1 | addVariantAnnotations(df, gene.of.interest.symbol)
|
Arguments
df |
gnomAD variant data frame |
gene.of.interest.symbol |
HGNC Symbol |
Value
A data frame with annotated variants.
Author(s)
Kate Sanders
Examples
1 2 3 | data("MUC1_variants")
cleanVariants <- removeUnwantedVariants(MUC1_variants)
annotatedVariants <- addVariantAnnotations(cleanVariants, "MUC1")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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