Man pages for Santaris/affinity
Functions to do thermodynamics on oligonucleotides
| affinity-package | Affinity |
| calc.dg | Calculate changes in free energy of binding |
| calc.dg.internal | Calculate changes in free energy of binding for... |
| calc.dh.ds | Calculate changes in enthalpy and entropy of oligonucleotides... |
| calc.k | Calculate the equilibrium constant from the Gibbs free energy |
| calc.k.internal | Calculate the equilibrium constant from the Gibbs free energy... |
| calc.po.dtm | Calculate adjustment to melting temperature for... |
| calc.tm | Calculate the melting temperature |
| calc.tm.internal | Calculate the melting temperature for oligonucleotides |
| calculate.affinity | Calculate thermodynamic variables of oligonucleotides |
| calculate.rnaseh.activity | Calculate the fitness of the DNA-only gap-region in... |
| publictm | Published melting temperatures for LNA-modified... |
| thermopar | Nearest neighbor thermodynamic parameters for LNA-modified... |
