FlushSet-methods: Compute Flushing criteria

In Senbee/FLUSH_LVS_bundle: FLUSH.LVS.bundle

Description

This function fits a quantile regression on an object of class RA

Usage

## S4 method for signature 'RA'
FlushSet(object, proportion = 0.6, delta = NULL, 
        lambda = delta, df=10,...)

Arguments

object	An object of class "RA"
proportion	Proportion of genes to filter out, i.e. the quantile to estimate in the quantile regression
delta	weighting parameter
lambda	weighting parameter
df	Degrees of freedom of the B-spline
...	Not used

Value

And object of class 'RA' with a new slot

Author(s)

Stefano Calza <[e-mail]>

References

Stefano Calza, Wolfgang Raffelsberger, Alexander Ploner, Jose Sahel, Thierry Leveillard and Yudi Pawitan. Filtering genes to improve sensitivity in oligonucleotide microarray data analysis - 2007 NAR

Examples

## Not run: demo(FLUSH.tour)
FlushSet(choe.RA)
FlushSet(choe.RA, delta = .5)

## End(Not run)

Senbee/FLUSH_LVS_bundle documentation built on May 9, 2019, 1:21 p.m.