genotypeMatrix: imports genotypeMatrix

In SeojinHwang/scadsum: nonconvex penalty with summary statistics and a reference panel

imports genotypeMatrix

Description

imports genotypeMatrix

Usage

genotypeMatrix(
  fileName,
  N,
  P,
  col_skip_pos,
  col_skip,
  keepbytes,
  keepoffset,
  fillmissing
)

Arguments

fileName	location of bam file
N	number of subjects
P	number of positions
col_skip_pos	which variants should we skip
col_skip	which variants should we skip
keepbytes	which bytes to keep
keepoffset	what is the offset

Value

an armadillo genotype matrix

SeojinHwang/scadsum documentation built on June 30, 2023, 10:52 p.m.