qdel: Delete SGE jobs using qdel
In ShadeWilson/ihme: Functions for Improving Life at IHME

Description Usage Arguments Value References Examples

Flexible job deletion using different patterning including job name, job id, job state, etc.

1 2	qdel(job_id = NA, full = FALSE, grep = "", state = "", state_id = NA, node = NA, force = FALSE, all = FALSE)

`job_id`	the job_id(s) to delete. If this is specified, all other arguments are overridden. If not specified, all other arguments to subset current jobs are taken into account
`full`	TRUE for full job names, FALSE otherwise. Affects what is found with grep when the job names are long
`grep`	a regular expression string to search for in the qstat output
`state`	string, grab only jobs in the given state. Most common are "r" (running) and "p" (pending). All options are p\|r\|s\|z\|S\|N\|P\|hu\|ho\|hs\|hd\|hj\|ha\|h\|a. Any combination of states is possible. See qstat manula page for more details.
`state_id`	the specific state(s) seen when qstat is run, ie 'r', 'qw', 'hqw'. Can pass in multiple
`node`	string name of the node(s) to delete jobs from. Can pass in multiple.
`force`	Adds the force flag, '-f' to the qdel command to force deletion if TRUE. Default is FALSE
`all`	if no job_ids are passed in and no arguments to subset qstat dataframe are given, all user jobs will be deleted if set to TRUE. Use with caution. Default is false.

Nothing. Prints out system output for qdel command.

http://gridscheduler.sourceforge.net/htmlman/htmlman1/qdel.html

qdel() # warning for no arguments passed in
qdel(all = TRUE) # deletes all running jobs
qdel(grep = "sti")
qdel(grep = "sti", node = c("cn555", "cn333")) # deletes all jobs matching 'sti' on either node cn555 or cn333
qdel(state = "p") # deletes all pending jobs
qdel(state_id = c("qw", "r")) # deletes all jobs in 'qw' OR 'r'