Bowtie2TophatIon_CLI-class: Bowtie2TophatIon_CLI

In SimonSchafferer/CLIHelperPackage: A packages that manages easy access to cmdLine applications within R (related to RNA-Seq)

Slots

slot1:

inFilePath "character"

slot2:

inFileNames "character"

slot3:

cliParams "character"

slot4:

outFilePath "character"

slot5:

outputFlag "character"

slot6:

bowtieIndexFilePath "character"

slot7:

matepairFileNames "character"

slot8:

outFileNames "character"

slot9:

pathToPicardTools "character"

slot9:

addNHTag "character"

SimonSchafferer/CLIHelperPackage documentation built on May 9, 2019, 1:32 p.m.