plot_bulk_traceplot: Traceplot of the posterior chain of the proportion (i.e., pi)...
In SimoneTiberi/DifferentialRegulation: Differentially regulated genes from scRNA-seq data
View source: R/plot_bulk_traceplot.R
plot_bulk_traceplot R Documentation
Traceplot of the posterior chain of the proportion (i.e., pi) of unspliced (U) counts in each group - bulk RNA-seq data
Description
plot_bulk_traceplot plots the traceplot of the posterior chain
of the proportion (i.e., pi) of unspliced (U) counts in each group.
The vertical grey dashed line indicates the burn-in
(the iterations on the left side of the burn-in are discarded in posterior analyses).
Usage
plot_bulk_traceplot(results, transcript_id)
Arguments
results
a list of data.frame objects,
computed via DifferentialRegulation (single-cell RNA-seq data),
or DifferentialRegulation_bulk (bulk RNA-seq data).
transcript_id
a character, indicating the transcript to plot.
Value
A gtable object.
Author(s)
Simone Tiberi simone.tiberi@unibo.it
See Also
DifferentialRegulation_bulk
Examples
# see the example of DifferentialRegulation_bulk function:
help(DifferentialRegulation_bulk)
SimoneTiberi/DifferentialRegulation documentation built on Feb. 5, 2024, 8:48 a.m.
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View source: R/plot_bulk_traceplot.R
| plot_bulk_traceplot | R Documentation |
Traceplot of the posterior chain of the proportion (i.e., pi) of unspliced (U) counts in each group - bulk RNA-seq data
Description
plot_bulk_traceplot plots the traceplot of the posterior chain
of the proportion (i.e., pi) of unspliced (U) counts in each group.
The vertical grey dashed line indicates the burn-in
(the iterations on the left side of the burn-in are discarded in posterior analyses).
Usage
plot_bulk_traceplot(results, transcript_id)
Arguments
results |
a |
transcript_id |
a character, indicating the transcript to plot. |
Value
A gtable object.
Author(s)
Simone Tiberi simone.tiberi@unibo.it
See Also
DifferentialRegulation_bulk
Examples
# see the example of DifferentialRegulation_bulk function:
help(DifferentialRegulation_bulk)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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