plot_traceplot: Traceplot of the posterior chain of the proportion (i.e., pi)...

In SimoneTiberi/DifferentialRegulation: Differentially regulated genes from scRNA-seq data

Traceplot of the posterior chain of the proportion (i.e., pi) of unspliced (U) counts in each group - single-cell RNA-seq data

Description

plot_traceplot plots the traceplot of the posterior chain of the proportion (i.e., pi) of unspliced (U) counts in each group. The vertical grey dashed line indicates the burn-in (the iterations on the left side of the burn-in are discarded in posterior analyses).

Usage

plot_traceplot(results, gene_id, cluster_id)

Arguments

results	a list of data.frame objects, computed via DifferentialRegulation (single-cell RNA-seq data), or DifferentialRegulation_bulk (bulk RNA-seq data).
gene_id	a character, indicating the gene to plot.
cluster_id	a character, indicating the cell cluster to plot.

Value

A gtable object.

Author(s)

Simone Tiberi [e-mail]

See Also

DifferentialRegulation

Examples

# see the example of DifferentialRegulation function:
help(DifferentialRegulation)

SimoneTiberi/DifferentialRegulation documentation built on Feb. 5, 2024, 8:48 a.m.