Man pages for StanleyXu/loci2path
Loci2path: regulatory annotation of genomic intervals based on tissue-specific expression QTLs

biocartaeQTL geneset enrichment query demo data
check.geneidcheck compatibility of gene identifiers between eQTL set and...
eqtlSet-classeqtlSet Class
eset.listeQTL geneset enrichment query demo data
geneSet-classgeneSet Class
getHeatmap-methodsGenerate heatmap of enrichment matrix from query result
getMat-methodsExtract tissue/geneset enrichment matrix from query result
getPathDescription-methodsExtract description for enriched pathways from query result...
getPval-methodsExtract tissue/geneset enrichment p-value distribution from...
getTissueDegree-methodsExtract tissue degree from query result
getWordcloud-methodsPlot word cloud using frequent terms of pathways and genes
loci2pathResult-classloci2pathResult Class
query.greQTL geneset enrichment query demo data
query-methodsQuery enrichment in geneset through multiple eQTL sets.
StanleyXu/loci2path documentation built on April 13, 2018, 10:45 p.m.