API for SteeleCD/CNomplexity
Analysis of Complex Copy Cumber and Structural Variants in Cancer Genomes.

Global functions
ABSOLUTEscore Source code
ABSOLUTEtest Source code
BFBCNscore Source code
CNscore Man page Source code
bootNMF Man page Source code
breakpointsExponential Source code
categoriseCN Source code
chromothripsis Man page Source code
chromothripsisSim Source code
combineFun Source code
combineRegions Source code
decision Source code
fishersMethod Source code
foldBackScore Source code
foldBackScoreBP Source code
genomeDoubling Man page Source code
getArmCN Source code
getArmInfo Source code
getArmLims Source code
getCNthresh Man page Source code
getChromArmAbberations Source code
getChromInfo Source code
getClustered Source code
getDists Source code
getRearrClass Man page Source code
getRuns Source code
getSingleScore Source code
getVars Source code
identifyBFBsetlength Source code
identifyBFBwindow Source code
loadCytoBand Source code
multiSimTest Source code
nmfFitMetrics Man page Source code
randomJoins Source code
randomOrder Source code
readFile Source code
runSingle Source code
sampleSimScore Source code
segChromPlot Source code
segLengthsExponential Source code
segPlot Man page Source code
setupBFB Source code
simSample Source code
singleBFBCNscore Source code
singleSamp Source code
singleSimTest Source code
splitSeg Source code
splitWindow Source code
swantonScore Source code
swantonTest Source code
walkChrom Source code
SteeleCD/CNomplexity documentation built on April 26, 2018, 11:16 a.m.