Description Usage Arguments Value
Construct a scatterplot comparing the p-value to the quantile of the informative variable, coloring points either based on an oracle procedure if it is available or based on the thresholds for the functional qvalue.
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x |
fqvalue object; an oracle procedure is available if the column |
pi0 |
A logical value TRUE/FALSE, indicating whether a second panel of the estimated pi0(z) should be shown underneath the scatterplot (default TRUE) |
threshold |
Vector of thresholds used for colors on the graph (default c(.005, .01, .05, .1)) |
cloglog |
A logical value TRUE/FALSE, indicating whether the plot should be on a log(-log(pvalue)) scale (default FALSE) |
... |
Extra arguments (not used) |
ggplot object (print to show the plot)
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