pool_matrix.matrix: Given a microarray/RNASeq matrix and a subset of columns,...

In StoreyLab/factorial-MA-RS: Draft of factorial manuscript (as a package)

Description

Given a microarray/RNASeq matrix and a subset of columns, pool within columns

Usage

## S3 method for class 'matrix'
pool_matrix(m, des, cond, average = FALSE)

Arguments

m	a matrix of RNA-Seq counts or microarray logFCs
des	Experiment design (such as built-in experimentDesign)
cond	vector used to subset expression matrix and design
average	Whether values should be averaged: otherwise they are summed

Value

The matrix, using the given subset, pooled within condition:bio

StoreyLab/factorial-MA-RS documentation built on May 9, 2019, 3:10 p.m.