StoreyLab/popkin: Estimate Kinship and FST under Arbitrary Population Structure

Provides functions to estimate the kinship matrix of individuals from a large set of biallelic SNPs, and extract inbreeding coefficients and the generalized FST (Wright's fixation index). Method described in Ochoa and Storey (2021) <doi:10.1371/journal.pgen.1009241>.

Getting started

Package details

Maintainer
LicenseGPL-3
Version1.3.23
URL https://github.com/StoreyLab/popkin/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("StoreyLab/popkin")
StoreyLab/popkin documentation built on Jan. 10, 2023, 1:39 p.m.