Association analysis using somatic mutations. It accounts for somatic mutation calling uncertainty by modeling the true somatic mutation status as a latent variable and exploiting read count data to augment the mutation calls. Two versions of the test are provided, one for mutation-level analysis using a single somatic mutation (mSAME) and the other one for gene-level analysis using multiple mutations within a gene (gSAME).
Package details |
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Maintainer | |
License | FHCRC |
Version | 0.0.0.9000 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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