fcmml: Fisher score method for estimating the regression coeffcients...
In Sun-lab/SAME: Somatic mutation Association test with Measurement Errors
fcmml R Documentation
Fisher score method for estimating the regression coeffcients in a mixture of logisitc regression.
Description
Fisher score method for estimating the regression coeffcients in a mixture of logisitc regression.
Usage
fcmml(Y, X, alpha, beta, T0S, T1S, converged = 1e-06, maxIT = 200)
Arguments
Y
The response variable. Must be binary.
X
The design matrix. Intercept included.
alpha
The initial values of the coefficients for the confounders.
beta
The initial value of the coefficient for the true somatic mutation value.
T0S
The weights vector for the mixture when the true somatic muation equals 0.
T1S
The weights vector for the mixture when the true somatic muation equals 1.
converged
The tolerance for the convergence. Default is 1e-6.
maxIT
The maximal number of the EM iteration times. Default is 200.
Value
The estimated regression coefficients.
Sun-lab/SAME documentation built on Jan. 27, 2024, 6:48 p.m.
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| fcmml | R Documentation |
Fisher score method for estimating the regression coeffcients in a mixture of logisitc regression.
Description
Fisher score method for estimating the regression coeffcients in a mixture of logisitc regression.
Usage
fcmml(Y, X, alpha, beta, T0S, T1S, converged = 1e-06, maxIT = 200)
Arguments
Y |
The response variable. Must be binary. |
X |
The design matrix. Intercept included. |
alpha |
The initial values of the coefficients for the confounders. |
beta |
The initial value of the coefficient for the true somatic mutation value. |
T0S |
The weights vector for the mixture when the true somatic muation equals 0. |
T1S |
The weights vector for the mixture when the true somatic muation equals 1. |
converged |
The tolerance for the convergence. Default is 1e-6. |
maxIT |
The maximal number of the EM iteration times. Default is 200. |
Value
The estimated regression coefficients.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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