ClamMap2: ClamMap
In SurfClam/bio.surfclam:

Description Usage Arguments Author(s) Examples

View source: R/ClamMap2.r

ClamMap

ClamMap2(area = "custom", ylim = c(40, 52), xlim = c(-74, -47),
  mapRes = "HR", land.col = "wheat", title = "", nafo = NULL,
  boundaries = "clam", bathy.source = "topex", isobaths = seq(100, 1000,
  100), bathcol = rgb(0, 0, 1, 0.1), topolines = NULL, topocol = rgb(0.8,
  0.5, 0, 0.2), points.lst = NULL, pt.cex = 1, lines.lst = NULL,
  poly.lst = NULL, contours = NULL, image.lst = NULL,
  color.fun = tim.colors, zlim, grid = NULL, stippling = F, lol = F,
  labels = NULL, labcex = 1.5, LT = T, plot.rivers = T,
  addSummerStrata = F, addsubareas = F, ...)

`area`	= 'custom' where xlim & ylim are specified or select from area list below
`mapRes`	= coastline detail ('LR' = low resolution, 'MR' = medium resolution, 'HR' = high resolution, 'UR' = ultra resolution)
`title`	= plot title
`boundaries`	= for ploting specific management boundaries
`bathcol`	= isobath line color, default is transparent blue
`topolines`	= plots topographic lines for specified elevations from topex data
`points.lst`	= points to overlay on map in PBSmapping format - list with 2 elements: 1st element is eventSet (EID, POS, X, Y), 2nd element is eventData (EID, pch, col, etc.)
`lines.lst`	= lines to overlay on map in PBSmapping format - list with 2 elements: 1st element is polySet (PID, SID, POS, X, Y), 2nd element is polyData (PID, SID, lty, col, etc.)
`poly.lst`	= polygons to overlay on map in PBSmapping format - list with 2 elements: 1st element is polySet (PID, SID, POS, X, Y), 2nd element is polyData (PID, SID, border, col, etc.)
`contours`	= plots overlaping polygons as contours (same format as poly.lst)
`image.lst`	= image to overlay on map - list with 3 elements (x, y, z), 'bathymetry' produces image from bathymetry data
`color.fun`	= color function for image
`zlim`	= zlim for image
`grid`	= size of grid in degrees, default is no grid
`stippling`	= adds stippling to land (purely for visual effect)
`lol`	= adds water colored border to coastline (purely for visual effect)
`isobath`	= plots bathymetry lines for specified depths from topex data
`bathcol`	= topolines line color, default is transparent brown