plotCellTypeTree: To plot cell type tree
In SydneyBioX/scClassify: scClassify: single-cell Hierarchical Classification
Description
Usage
Arguments
Value
Examples
Description
To plot cell type tree
Usage
1
plotCellTypeTree(cutree_list, group_level = NULL)
Arguments
cutree_list
A list indicates the hierarchical cell type tree
group_level
Indicate whether plot or not
Value
A ggplot object visualising the HOPACH tree
Examples
1
2
3
data("trainClassExample_xin")
plotCellTypeTree(cellTypeTree(trainClassExample_xin))
SydneyBioX/scClassify documentation built on Oct. 22, 2021, 4:03 p.m.
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Description Usage Arguments Value Examples
Description
To plot cell type tree
Usage
1 | plotCellTypeTree(cutree_list, group_level = NULL)
|
Arguments
cutree_list |
A list indicates the hierarchical cell type tree |
group_level |
Indicate whether plot or not |
Value
A ggplot object visualising the HOPACH tree
Examples
1 2 3 | data("trainClassExample_xin")
plotCellTypeTree(cellTypeTree(trainClassExample_xin))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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