filter_contextpp_scores: Filter context++ scores by the normalised expression values...

Description Usage Arguments Value

Description

Filter context++ scores by the normalised expression values of putative target transcripts within a given biological context

Usage

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filter_contextpp_scores(contextpp_scores_filename,
  expression_values_filename, TPM_expression_threshold)

Arguments

contextpp_scores_filename

The file name of a context++ results file

expression_values_filename

The file name of a salmon output file of normalised expression values

TPM_expression_threshold

Transcripts with lower relative abundance than this threshold are removed

Value

A tibble of context++ scores filtered by a given TPM threshold


TBradley27/filtar_R documentation built on May 19, 2019, 8:56 p.m.