CISBPRNA_mm_PWM: CISBPRNA Mus muscululs PWM list
In TaliaferroLab/FeatureReachR: Extract Enriched Biological Features From RNA-seq Data
Description
Usage
Format
Source
Description
A list of position weight Matrices (PWM) of recognition motifs for RNA
binding proteins (RBPs) as documented by CISBPRNA for Mus musculus.
Usage
1
Format
A list of named matrices with 188 entries. The name is unique
refering to both the RBP and its specific motif, the matrix columns
represent positions, and the rows are the probability of occurance for each
base "A", "C", "G", and "T". Each column sums to 1.
- PWM
probability matrix of a RBP motif
Source
http://cisbp-rna.ccbr.utoronto.ca/bulk.php
Download Mus musculus species archive
TaliaferroLab/FeatureReachR documentation built on Aug. 15, 2021, 2:21 p.m.
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Description Usage Format Source
Description
A list of position weight Matrices (PWM) of recognition motifs for RNA binding proteins (RBPs) as documented by CISBPRNA for Mus musculus.
Usage
1 |
Format
A list of named matrices with 188 entries. The name is unique refering to both the RBP and its specific motif, the matrix columns represent positions, and the rows are the probability of occurance for each base "A", "C", "G", and "T". Each column sums to 1.
- PWM
probability matrix of a RBP motif
Source
http://cisbp-rna.ccbr.utoronto.ca/bulk.php Download Mus musculus species archive
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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