from_id2name: from_id2name
In TaoDFang/gerr: Gene-set Enrichment with Regularized Regression
Description
Usage
Arguments
Value
Examples
View source: R/supplementary_functions.R
Description
If you use the default pathway databases(GO Ontologyand REACTOME),this function can help you to get pathways
names from pathways IDs. If not found, the gene-set name is used.
Usage
1
from_id2name(selected_pathways)
Arguments
selected_pathways
A list of GO and/or REACTOME pathways IDs. Each elmment is this list can be a single
id or multi-ids seperated "#"
Value
A list of GO sub-root or REACTOME root names for provided pathways.
Examples
1
from_id2name((selected_pathways=list(c("GO:0032991#GO:0044425#GO:0044464"),"R-HSA-5357801")))
TaoDFang/gerr documentation built on July 30, 2019, 6:54 p.m.
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Description Usage Arguments Value Examples
View source: R/supplementary_functions.R
Description
If you use the default pathway databases(GO Ontologyand REACTOME),this function can help you to get pathways names from pathways IDs. If not found, the gene-set name is used.
Usage
1 | from_id2name(selected_pathways)
|
Arguments
selected_pathways |
A list of GO and/or REACTOME pathways IDs. Each elmment is this list can be a single id or multi-ids seperated "#" |
Value
A list of GO sub-root or REACTOME root names for provided pathways.
Examples
1 | from_id2name((selected_pathways=list(c("GO:0032991#GO:0044425#GO:0044464"),"R-HSA-5357801")))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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