get_sig_rows: works out if a peptide has at least one significant value...
In TeamMacLean/pepdiff: Analysing TSL PRM Peptide Data
get_sig_rows R Documentation
works out if a peptide has at least one significant value across the experiment
Composes a matrix of the 'metric' significance values with peptides in rows, experiments
in columns and works out if each peptide row has a value below the stated cut off
Description
#' returns a logical vector of length equal to row number of matrix
Usage
get_sig_rows(l, metric = "bootstrap_t_pval", sig_level = 0.05)
Arguments
l
list of results, usually from 'compare_many()'
metric
the test metric used to determine significance one of:
sig_level
significance level cutoff
TeamMacLean/pepdiff documentation built on April 24, 2023, 7:48 a.m.
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| get_sig_rows | R Documentation |
works out if a peptide has at least one significant value across the experiment Composes a matrix of the 'metric' significance values with peptides in rows, experiments in columns and works out if each peptide row has a value below the stated cut off
Description
#' returns a logical vector of length equal to row number of matrix
Usage
get_sig_rows(l, metric = "bootstrap_t_pval", sig_level = 0.05)
Arguments
l |
list of results, usually from 'compare_many()' |
metric |
the test metric used to determine significance one of: |
sig_level |
significance level cutoff |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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