get_chr_names_in_bam: Function to collect chromosome named
In TearsWillFall/DNAfrags: Filter DNA fragments in BAM files by length and location
get_chr_names_in_bam R Documentation
Function to collect chromosome named
Description
This function takes a BAM file and collects the chr names from the bam
file.
Usage
get_chr_names_in_bam(
bin_path = "tools/samtools/samtools",
bam = "",
verbose = FALSE
)
Arguments
bin_path
Path to samtools executable. Default path tools/samtools/samtools.
bam
Path to directory with BAM files to merge.
verbose
Enables progress messages. Default False.
TearsWillFall/DNAfrags documentation built on March 26, 2022, 6:02 a.m.
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| get_chr_names_in_bam | R Documentation |
Function to collect chromosome named
Description
This function takes a BAM file and collects the chr names from the bam file.
Usage
get_chr_names_in_bam( bin_path = "tools/samtools/samtools", bam = "", verbose = FALSE )
Arguments
bin_path |
Path to samtools executable. Default path tools/samtools/samtools. |
bam |
Path to directory with BAM files to merge. |
verbose |
Enables progress messages. Default False. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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