merge_bam: Merge BAM files in directory
In TearsWillFall/DNAfrags: Filter DNA fragments in BAM files by length and location
View source: R/filter_fragments.R
merge_bam R Documentation
Merge BAM files in directory
Description
This function takes a BAM file and merges it with others found within a
directory. This function is still Work In Progress (WIP).
Usage
merge_bam(
bin_path = "tools/samtools/samtools",
out_bam = "",
bam_dir = "",
verbose = FALSE
)
Arguments
out_bam
Name of merged BAM.
bam_dir
Path to directory with BAM files to merge.
verbose
Enables progress messages. Default False.
TearsWillFall/DNAfrags documentation built on March 26, 2022, 6:02 a.m.
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View source: R/filter_fragments.R
| merge_bam | R Documentation |
Merge BAM files in directory
Description
This function takes a BAM file and merges it with others found within a directory. This function is still Work In Progress (WIP).
Usage
merge_bam( bin_path = "tools/samtools/samtools", out_bam = "", bam_dir = "", verbose = FALSE )
Arguments
out_bam |
Name of merged BAM. |
bam_dir |
Path to directory with BAM files to merge. |
verbose |
Enables progress messages. Default False. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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