get_norm_local_coverage: Get normalized local coverage from segmentation data (CNA)...
In TearsWillFall/tfProfiling: An implementation of PeterUlz (https://github.com/PeterUlz/TranscriptionFactorProfiling) TranscriptionFactorProfiling pipeline in R for GNU/Unix based systems
Description
Usage
Arguments
Value
Description
This function takes normalized data for local coverage as input,
as well as a valid genomic position for a single base and returns a log2 corrected value for said position
Usage
1
get_norm_local_coverage(pos = "", chr = "", norm_log2 = "")
Arguments
pos
Genomic position
chr
Chromosome
norm_log2
DATA.FRAME with normalized local coverage
Value
A double with the local coverage
TearsWillFall/tfProfiling documentation built on Aug. 7, 2021, 9:40 a.m.
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Description Usage Arguments Value
Description
This function takes normalized data for local coverage as input, as well as a valid genomic position for a single base and returns a log2 corrected value for said position
Usage
1 | get_norm_local_coverage(pos = "", chr = "", norm_log2 = "")
|
Arguments
pos |
Genomic position |
chr |
Chromosome |
norm_log2 |
DATA.FRAME with normalized local coverage |
Value
A double with the local coverage
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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