run_slide: Run SLIDE
In TheJacksonLaboratory/mousegwas: Run in-bred mouse GWAS
Description
Usage
Arguments
Value
View source: R/run_MultiTrans.R
Description
Run SLIDE
Usage
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run_slide(
basedir,
nsnp,
pval = 0.05,
windowSize = 1000,
samps = 1e+05,
seed = 100
)
Arguments
basedir
Where to read and write the files
nsnp
number of SNPs
pval
desired pvalue (default 0.05)
windowSize
same as in run_C
samps
number of random sampling
seed
rand seed
Value
output thresholds file
TheJacksonLaboratory/mousegwas documentation built on Sept. 27, 2021, 9:14 a.m.
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Description Usage Arguments Value
View source: R/run_MultiTrans.R
Description
Run SLIDE
Usage
1 2 3 4 5 6 7 8 | run_slide(
basedir,
nsnp,
pval = 0.05,
windowSize = 1000,
samps = 1e+05,
seed = 100
)
|
Arguments
basedir |
Where to read and write the files |
nsnp |
number of SNPs |
pval |
desired pvalue (default 0.05) |
windowSize |
same as in run_C |
samps |
number of random sampling |
seed |
rand seed |
Value
output thresholds file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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