Man pages for TheoMichelot/localGibbs
Local Gibbs Movement Model
| catToDummy | Categorical to dummy covariates |
| compareUD | Compare two utilisation distributions |
| fitRSF | Fit RSF |
| HMMprobs | State-dependent distributions for multistate local Gibbs |
| listToArray | Transform list of rasters to array |
| MCsample | Generate Monte Carlo samples |
| n2w | Transform parameters from natural to working scale |
| nllkLG | Negative log-likelihood function for the local Gibbs model |
| nllkLG_norm | Local Gibbs negative log likelihood (normal transition... |
| nllkLG_norm_rcpp | Negative log-likelihood for the local Gibbs model (C++) |
| nllkLG_rcpp | Negative log-likelihood for the local Gibbs model (C++) |
| nllkMSLG | Negative log-likelihood for multistate local Gibbs model |
| plotRaster | Plot raster with ggplot |
| rastRSF | Calculate raster of RSF |
| rsf | Resource selection function |
| rsfvec | Resource selection function (vectorized for xy) |
| scalez | Scale Monte Carlo sample of end points |
| simLG | Generate track from local Gibbs model |
| simLG_rcpp | Simulation function (local Gibbs sampler) |
| simRaster | Simulate random covariate field |
| simSSF | Simulate from SSF |
| simSSF_rcpp | SSF simulation function (Fortin et al 2005) |
| simZeros_rcpp | Sample zeros for SSF |
| truncgridr | Truncate the sample of avilability radii |
| viterbi | Viterbi algorithm for multistate local Gibbs model |
| w2n | Transform parameters from working to natural scale |
