viterbi: Viterbi algorithm for multistate local Gibbs model

In TheoMichelot/localGibbs: Local Gibbs Movement Model

Viterbi algorithm for multistate local Gibbs model

Description

Viterbi algorithm for multistate local Gibbs model

Usage

viterbi(xy, r = NULL, sigma = NULL, beta, gamma, MCgrids, covlist,
  norm = FALSE)

Arguments

xy	Matrix of observed locations
r	Vector of availability radii (if norm=FALSE)
sigma	Vector of standard deviations (if norm=TRUE)
beta	Vector of selection parameters
gamma	Transition probability matrix
MCgrids	List of Monte Carlo samples, with components gridc and gridz. As output by MCsample.
covlist	List of covariate rasters
norm	Logical. TRUE if normal transition density. (Only for multistate case)

TheoMichelot/localGibbs documentation built on March 24, 2022, 5:56 a.m.