nllkLG: Negative log-likelihood function for the local Gibbs model

In TheoMichelot/localGibbs: Local Gibbs Movement Model

Negative log-likelihood function for the local Gibbs model

Description

Negative log-likelihood function for the local Gibbs model

Usage

nllkLG(par, ID = NULL, xy, rdist = c("fixed", "exp", "gamma", "weibull"),
  MCgrids, cov, lim, res, debug = FALSE)

Arguments

par	Vector of parameters, i.e. resource selection coefficients and parameters for the distribution of the radius.
ID	Vector of track IDs
xy	Matrix of observed locations
rdist	Distribution of availability radius ("fixed", "exp", "gamma", or "weibull")
MCgrids	List of Monte Carlo samples, with components gridr (if needed), gridc, and gridz. As output by MCsample.
cov	Array of covariates (one layer for each covariate)
lim	Limits of the covariate rasters.
res	Resolution of the covariate rasters.
debug	Logical. If TRUE, the function also returns the log-likelihood of each step

TheoMichelot/localGibbs documentation built on March 24, 2022, 5:56 a.m.