Files in Timothy-Barry/coproanalysis
Analyze CoPRO and Related Data
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/calculateDispersion.R
R/calculatePercentiles.R
R/factorAnalysis.R
R/findChr.R
R/findTssOnFactorScorePlot.R
R/getCIs.R
R/identifyTSNs.R
R/identifyTss.R
R/loadCoproData.R
R/loadData.R
R/normalizeCoProDat.R
R/plotCountVsLength.R
README.md
coproanalysis.Rproj
exampleUsage/exampleDriver2.R
man/calculateDispersion.Rd
man/calculatePercentiles.Rd
man/computeFactorAnalysis.Rd
man/findChr.Rd
man/findTssOnFactorScorePlot.Rd
man/getBootstrapSamples.Rd
man/getFactorScores.Rd
man/getSEFromBootStats.Rd
man/identifyTSNs.Rd
man/identifyTSNsR.Rd
man/identifyTSSonChromAndStrand.Rd
man/identifyTSSs.Rd
man/loadCoproData.Rd
man/loadData.Rd
man/normalizeCoProData.Rd
man/plotCountVsLength.Rd
man/pointEvectorsInSameDirection.Rd
tests/testthat.R
tests/testthat/test-calculateDispersion.R
tests/testthat/test-calculatePercentiles.R
tests/testthat/test-identifyTSNs.R
tests/testthat/test-identifyTss.R
tests/testthat/test-normalizeCoProDat.R
