identifyTSSs: Identify TSSs
In Timothy-Barry/coproanalysis: Analyze CoPRO and Related Data
Description
Usage
Arguments
Value
Description
Identify TSSs
Usage
1
identifyTSSs(dat, thresh = 60)
Arguments
dat
Data.table object containing columns corresponding to chromosome, strand, and ID5. The ID5 should correspond to bases labelled as TSNs.
thresh
the distance over which TSNs are clustered into TSSs
Value
NULL; the data.table object is modified in-place; a column corresponding to TSS ID, tssID, is appended to the passed-in data.table.
Timothy-Barry/coproanalysis documentation built on Feb. 12, 2020, 7:33 a.m.
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Description Usage Arguments Value
Description
Identify TSSs
Usage
1 | identifyTSSs(dat, thresh = 60)
|
Arguments
dat |
Data.table object containing columns corresponding to chromosome, strand, and ID5. The ID5 should correspond to bases labelled as TSNs. |
thresh |
the distance over which TSNs are clustered into TSSs |
Value
NULL; the data.table object is modified in-place; a column corresponding to TSS ID, tssID, is appended to the passed-in data.table.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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