normalizeCoProData: Normalize CoPRO data
In Timothy-Barry/coproanalysis: Analyze CoPRO and Related Data
Description
Usage
Arguments
Value
View source: R/normalizeCoProDat.R
Description
Normalize CoPRO data
Usage
1
normalizeCoProData(dat, method = "genomeWideLinModel")
Arguments
dat
the CoPRO data in data.table format
method
what algorithm to use to normalize the data. Currently the only supported algorithm is genome-wide linear model fit.
Value
the normalized CoPRO data, plus an additional column tot for total (i.e., normalized C + U) reads. All rows with a value of 0 for tot are removed. The column R is also removed.
Timothy-Barry/coproanalysis documentation built on Feb. 12, 2020, 7:33 a.m.
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Description Usage Arguments Value
View source: R/normalizeCoProDat.R
Description
Normalize CoPRO data
Usage
1 | normalizeCoProData(dat, method = "genomeWideLinModel")
|
Arguments
dat |
the CoPRO data in data.table format |
method |
what algorithm to use to normalize the data. Currently the only supported algorithm is genome-wide linear model fit. |
Value
the normalized CoPRO data, plus an additional column tot for total (i.e., normalized C + U) reads. All rows with a value of 0 for tot are removed. The column R is also removed.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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