Timothy-Barry/coproanalysis
Analyze CoPRO and Related Data

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Timothy-Barry/coproanalysis: Analyze CoPRO and Related Data
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Analyze CoPRO and Related Data

calculateDispersionCaclulate dispersion
calculatePercentilesCalculate percentiles
computeFactorAnalysisCompute a factor analysis using the SVD method
findChrFind chromosome
findTssOnFactorScorePlotFind TSS on plot of factor scores
getBootstrapSamplescomputeFactorAnalysisWithBootstrappedCIs
getFactorScoresgetFactorScores
getSEFromBootStatsgetCIFromBootStats
identifyTSNsIdentify TSNs
identifyTSNsRIdentify TSNs using the R column
identifyTSSonChromAndStrandIndentify TSS ids for given chromosome and strand
identifyTSSsIdentify TSSs
loadCoproDataLoad CoPRO dataset
loadDataLoad data with given file name
normalizeCoProDataNormalize CoPRO data
plotCountVsLengthPlot transcript count vs. length
pointEvectorsInSameDirectionpointEvectorsInSameDirection
Timothy-Barry/coproanalysis documentation built on Feb. 12, 2020, 7:33 a.m.

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