bn: Adjust quantification values using bridging channels

Description Usage Arguments Value Examples

View source: R/combine.R

Description

Adjust quantification values using bridging channels to normalise across isobaric tag multiplexes. Note that the bridge channels are not normalised.

Usage

1
bn(values, plex1_ix, plex2_ix, bridge1_ix, bridge2_ix)

Arguments

values

vector of quantification values

plex1_ix

index for quantification values in multiplex 1

plex2_ix

index for quantification values in multiplex 2

bridge1_ix

index for bridge sample(s) in multiplex 1

bridge2_ix

index for bridge sample(s) in multiplex 1

Value

bridge normalised values

Examples

1
bn(c(1,1,2,2,2,4), plex1_ix=1:2, plex2_ix=4:5, bridge1_ix=3, bridge2_ix=6)

TomSmithCGAT/OptProc documentation built on Aug. 14, 2020, 8:23 p.m.