bn: Adjust quantification values using bridging channels

In TomSmithCGAT/OptProc:

Adjust quantification values using bridging channels

Description

Adjust quantification values using bridging channels to normalise across isobaric tag multiplexes. Note that the bridge channels are not normalised.

Usage

bn(values, plex1_ix, plex2_ix, bridge1_ix, bridge2_ix)

Arguments

values	vector of quantification values
plex1_ix	index for quantification values in multiplex 1
plex2_ix	index for quantification values in multiplex 2
bridge1_ix	index for bridge sample(s) in multiplex 1
bridge2_ix	index for bridge sample(s) in multiplex 1

Value

bridge normalised values

Examples

bn(c(1,1,2,2,2,4), plex1_ix=1:2, plex2_ix=4:5, bridge1_ix=3, bridge2_ix=6)

TomSmithCGAT/OptProc documentation built on July 22, 2023, 12:08 a.m.